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#1InterPro - Wikipedia
InterProScan is a software package that allows users to scan sequences against member database signatures. Users can use this signature ...
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#2InterProScan
What is InterProScan? ... InterPro is a database which integrates together predictive information about proteins' function from a number of partner resources, ...
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#3InterProScan - GO Wiki
InterProScan is a piece of software which scans a range of protein signatures against your sequence. These signatures mainly represent ...
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#4InterProScan-Sapelo2 - Research Computing Center Wiki
"InterProScan is a tool that combines different protein signature recognition methods into one resource. The number of signature databases and ...
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#5InterProScan 5 - Google Code
Projects · Search · About · Project · Source · Issues · Wikis · Downloads. interproscan. Scans a range of protein signatures against your sequence.
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#6Domains (2) - Openprot.org
Predicted domains (InterProScan 5.14-53.0, https://github.com/ebi-pf-team/interproscan/wiki). OpenProt release 1.3 - ...
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#7Interproscan – MetaCentrum
version 5.20-59.0 in module interproscan-5.20-59.0 ... IterProScan 5 user's guide https://github.com/ebi-pf-team/interproscan/wiki ...
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#8InterProScan for Plants - Biostars
For example, if Pathway analysis is enabled in InterProScan then it ... below<https://code.google.com/p/interproscan/wiki/HowToRun> I want…
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#9Settings - InterPro
InterProScan Settings (modification temporarily disabled). Protocol: http:// https:// Hostname: Port: Root: Status: Reachable ...
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#10The InterPro protein families database - NCBI
The InterProScan software is available: (i) as a browser-based tool for ... (https://code.google.com/p/interproscan/wiki/Introduction).
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#11Bioinformatics:Proteomics - TAMU HPRC
module spider InterProScan. Additional notes on how to run InterProscan. InterPro is a resource that provides functional analysis of protein ...
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#12EMBL-EBI - InterProScan documentation
How can I scan nucleic acid sequences in InterProScan 5? ... instructions for compiling gfortran can be found at: http://gcc.gnu.org/wiki/.
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#13All Repositories - Galaxy | Tool Shed
Interproscan is a batch tool to query the Interpro database. It provides annotations based on multiple searches of profile and other functional databases ...
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#14Install - PanTools manual - Bioinformatics
Information about the tool tool can found on their webpage https://github.com/ebi-pf-team/interproscan/wiki/HowToDownload
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#15Empty InterproScan output - usegalaxy.eu support - Galaxy Help
I recently received two independent “errors” from interproscan after running ... Refer to https://github.com/ebi-pf-team/interproscan/wiki/ ...
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#16InterProScan - Bioinformatics in BioMed - Google Sites
InterProScan is a tool that combines different protein signature ... http://wiki.bioinformatics.ucdavis.edu/index.php/InterProScan#Iprscan_Options.
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#17eiprscan manual - EMBOSS
Wiki. The master copies of EMBOSS documentation are available at ... InterProScan is a tool that combines different protein signature recognition methods ...
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#18InterProScan - UFRC Help and Documentation
This interproscan software allows you to query your sequence against ... See https://code.google.com/p/interproscan/wiki/i5RC6HowToRun for ...
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#19biodbcore-000315: InterPro - FAIRsharing
ready Integrated resource of protein families, domains and functional sites ; InterProScan, https://github.com/ebi-pf-team/interproscan/wiki ; Nigthtingale, https ...
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#20BioHPC Cloud: User Guide - CBSU
Manual: https://github.com/ebi-pf-team/interproscan/wiki/HowToRun ; Download: ftp://ftp.ebi.ac.uk/pub/software/unix/iprscan/5/ ; Notes: ##Speed ...
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#21Bio.SearchIO.InterproscanIO package - Biopython
This module adds support for parsing InterProScan XML output. The InterProScan is ... Documentation: https://github.com/ebi-pf-team/interproscan/wiki ...
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#22A Systematic Bioinformatics Approach to Identify High Quality ...
... InterProScan Download and Requirements. AND . Accessed 27 October2016https://github.com/ebi-pf-team/interproscan/wiki/HowToDownload ...
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#23InterProScan | WestGrid
InterProScan. InterProScanSoftware Versions ... For More Information. https://github.com/ebi-pf-team/interproscan/wiki ...
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#24Commits · Aurélien Luciani / sequence-analyses · GitLab
services/interproscan');. const MIN_SEQUENCE_SIZE = 11;. const main = async ({ input, type, email, output, forceOutput }) => {.
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#25readme_mip3V1.txt
... obtainable from http://biopython.org/wiki/Download BLAST+ - obtainable ... To further filter out microProteins we have to run InterproScan for these ...
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#26InterProScan annotation v3.2 | Daktulosphaira vitifoliae | BIPAA
Analysis Name, InterProScan annotation v3.2. Method, InterProScan annotation v3.2 (5.13-52.0). Source, BIPAA. Date performed, 2018-03-06.
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#27SARKER Bishnu / GrAPFI - GitLab Inria
Follow the instructions mentioned here for details of How to Run: https://github.com/ebi-pf-team/interproscan/wiki/HowToRun.
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#28read_interpro: Read InterProScan .tsv files. in thackl/thacklr
read_interpro: Read InterProScan .tsv files. ... Source. https://github.com/ebi-pf-team/interproscan/wiki/OutputFormats.
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#29RO testbed - Confluence Mobile - PSNC Wiki
Name Link Automatic; generation Platform AO Ligand binding sites; comparison wiki; github; RODL* YES WINGS Workflow Decay wiki; RODL Partly Taverna X Repaired Workflow wiki; RODL Partly Taverna X
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#30一个用interproscan做基因注释的简易教程 - 阿里云开发者社区
如果你的电脑防火墙阻止访问这个网站，你课以下载本地化的InterProScan 5 lookup service（https://code.google.com/p/interproscan/wiki/LocalLookupService） 或者关 ...
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#31Bio::SeqIO::interpro - InterProScan XML input/output stream
Bio::SeqIO::interpro - InterProScan XML input/output stream ... General discussion http://bioperl.org/wiki/Mailing_lists - About the mailing lists Support ...
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#32InterProScan 5.0 - GitHub
InterProScan 5. Analyses, Architecture and JMS. Introduction to InterProScan: automatic annotation of protein sequence. Protein. Sequence. Predictive.
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#33Available software - CC Doc
Homepage: http://genome.sph.umich.edu/wiki/BamUtil URL: ... interproscan, bio, 5.52-86.0, 5.53-87.0, 5.40-77.0, 5.23-62.0, 5.50-84.0.
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#34Ben Tully on Twitter: "FuncSanity Runs KofamScan, KEGG ...
4 PhyloSanity · cjneely10/MetaSanity Wiki ... FuncSanity Runs KofamScan, KEGG-Decoder, Prokka, VirSorter, InterProScan and searches proteins against the ...
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#35VCRU Bioinformatics - Programs available - Vegetable Crops ...
https://github.com/tanghaibao/jcvi/wiki/ALLMAPS · Installation notes ... http://code.google.com/p/interproscan/wiki/Introduction · Installation notes ...
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#36A simple tutorial for gene annotation with interproscan - actorsfit
Official website address: http://www.ebi.ac.uk/interpro/download.html. github manual address: https://github.com/ebi-pf-team/interproscan/wiki ...
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#37About TGD Wiki - Tetrahymena Genome Database
... a file named Tt_IPRScan1.lst that summarizes protein domain information determined by using the InterProScan tool to query each T. thermophila gene ...
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#38InterProScan 5: genome-scale protein function classification
InterProScan 5: genome-scale protein function classification. Published in. Bioinformatics, January 2014. DOI, 10.1093/bioinformatics/btu031. Pubmed ID.
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#39Tools | Analysis and Bioinformatics for Marine Science - ABiMS
https://github.com/ebi-pf-team/interproscan/wiki/ImprovingPerformance, or; /opt/abims/interproscan/interproscan.wiki/interproscan.wiki/ImprovingPerformance.
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#40A simple tutorial for making gene annotations with interproscan
Official website address: http://www.ebi.ac.uk/interpro/download.html. Github manual address: https://github.com/ebi-pf-team/interproscan/wiki ...
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#41Installed Software - Computerome 2.0 Wiki
adapterremoval/2.2.1a drop-seq_tools/2.0.0 interproscan/5.11-51.0 ngsadmix/32 savvy/1.2.0. AdapterRemoval/2.2.2 dropest/0.8.5 ...
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#42Interproscan - University of Oslo - UiO
InterProScan is a bioinformatics tool that provides a one-stop-shop for ... https://code.google.com/p/interproscan/wiki/Introduction ...
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#43Available Software - ACENET
InterProScan, 5.11-51.0, interproscan, interproscan.sh ... Retrieved from "https://wiki.ace-net.ca/w/index.php?title= ...
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#44基因注释-InterProScan_hs6605015的博客
基因注释-InterProScan官网地址：http://www.ebi.ac.uk/interpro/download.htmlgithub使用 ... https://github.com/ebi-pf-team/interproscan/wiki ...
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#454.x_help:formats:databanks_formats [The TriAnnot Project Wiki]
Blast, Fasta databank indexed by Blast formatdb/makeblastdb executable .nXX / .pXX. HMM, Pfam databank for InterProScan .hmm ...
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#46Using InterProScan like a pro - Lotus Base
When InterProScan includes additional prediction algorithms, you can simply ... The InterProScan wiki has the information on what does each ...
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#47Installing software on marvin - wiki
Use /shelf/modulefiles/ for anything big (I'm looking at you interproscan). The text files that tells modules that the software is there are ...
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#48InterProScan5 - FGI - Finnish Grid Infrastructure - Eduuni-wiki
InterProScan Runtime Environment home page. Examples. Here is an example of running InterProScan5 in grid. The example runs an InterProScan search for a ...
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#49blaxterlab/interproscan - Docker Image
interproscan -docker. Docker container to run EBI Interproscan. Follows instructions at https://github.com/ebi-pf-team/interproscan/wiki/HowToDownload and ...
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#50eolesin/AMOR_Indiv_Assembly_Protocol Wiki
10_GENE_TABLES - eolesin/AMOR_Indiv_Assembly_Protocol Wiki. Switched back over to kjempefuru for this ... Convert gene table to fasta file for interproscan.
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#51yaanlpc / RGAugury / wiki / Home - Bitbucket
Container version of RGAugury Installation, including Docker and Podman. steps: Installation of Interproscan; Installation of ...
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#52functional analysis prediction with InterProScan - Common ...
Workflow: functional analysis prediction with InterProScan ... here: https://github.com/ebi-pf-team/interproscan/wiki/HowToDownload
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#53GPRO Wiki - GyDB org
Running INTERPROSCAN via GPRO; Processing INTERPROSCAN outputs. Augustus. Running Augustus via GPRO. Menu Tools: Alignment analysis.
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#54fGAP Documentation - Read the Docs
InterProScan scans a sequence for matches against the InterPro protein signature databases. https://github.com/ebi-pf-team/interproscan/wiki.
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#55Functional annotation and enrichment analysis - BITS wiki
The Gene Ontology (GO) is a collaboration between several databases. The purpose of GO is to provide a set of standardized (everyone in the ...
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#56InterProScan的使用教程 - 生信之家
这款软件的安装可以完全按照InterProScan说明文档中的教程来操作，简单的介绍下 ... 详情可以查看https://github.com/ebi-pf-team/interproscan/wiki/ ...
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#57安装 interproscan | Bing
... https://github.com/ebi-pf-team/interproscan/wiki/KnownIssues. 运行报错：. Command: bin/blast/ncbi-blast-2.3.0+/rpsbproc -i ...
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#582基因功能注释之SwissProt和Interproscan | 码农家园
官网地址：??????http://www.ebi.ac.uk/interpro/download.html. github：https://github.com/ebi-pf-team/interproscan/wiki. 1. 下载并解压 ...
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#59一个用interproscan做基因注释的简易教程_weixin_34194551 ...
如果你的电脑防火墙阻止访问这个网站，你课以下载本地化的InterProScan 5 lookup service（https://code.google.com/p/interproscan/wiki/LocalLookupService） 或者关 ...
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#60使用InterProScan进行GO注释- 生信媛
InterProScan 则可以对InterPro数据库进行搜索注释你的序列数据。 ... Output Formats ：https://github.com/ebi-pf-team/interproscan/wiki/OutputFormats.
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#611. Overview — GOMAP-Singularity v1.3.8 documentation
InterProScan -5.25-64.0 was downloaded from https://github.com/ebi-pf-team/interproscan/wiki and used to annotate input sequences [5].
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#62InterProScan from AgBase - Github Help
code for building interproscan docker container and supporting scripts. ... https://github.com/ebi-pf-team/interproscan/wiki/ ...
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#63转载]InterProScan的使用教程- 黄顺谋的博文 - 科学网—博客
而InterProScan则是一款可以使用InterPro数据库的软件(more information about ... 详情可以查看https://github.com/ebi-pf-team/interproscan/wiki/ ...
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#64Singularity.interpro_v5.39-77.0 · master - GAFL - Gitlab IN2P3
... From:debian:9.5 #container for interproscan-5.39-77.0 #JL uodated ... https://github.com/ebi-pf-team/interproscan/wiki installation in: ...
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#65A method of introducing a InterProScan5 to the local ...
InterProScan は、アミノ酸配列の特徴を複数のデータベースを対象にまとめて検索することによって、問い合わせ ... https://github.com/ebi-pf-team/interproscan/wiki
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#66interproscan使用遇到的问题-转录组 - 生信技能树
最近在学习interproscan的使用，但是一直会遇到报错error while loading shared libraries: ... https://github.com/ebi-pf-team/interproscan/wiki/ ...
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#67MAKER Tutorial for WGS Assembly and Annotation Winter ...
MAKER Tutorial for WGS Assembly and Annotation Winter School 2018. From MAKER Wiki. Jump to navigation Jump to search ...
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#68SAPP / Modules / Interproscan - GitLab
InterProScan annotation and to RDF conversion module. ... error occurred while fetching folder content. I. Interproscan. Project ID: 874742.
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#69InterProScan的使用教程
详情可以查看https://github.com/ebi-pf-team/interproscan/wiki/InstallationRequirements. 配置完后可以进行安装了，其实解压缩就可以了：
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#70InterProScan 5.25-64.0 安装和使用 - 博客园
引用自 每日一生信--interproscan安装及使用（终结版）原文官网：http://code.google.com/p/interproscan/wiki/Introduction.
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#71【2】基因功能注释之SwissProt和Interproscan - 代码先锋网
【2】基因功能注释之SwissProt和Interproscan，代码先锋网，一个为软件开发程序员提供代码片段和技术 ... github：https://github.com/ebi-pf-team/interproscan/wiki.
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#72【5.2.1.2】interproscan安装及使用
而Interproscan就是可以将你的蛋白序列跟这个这个数据比对，从而给你的 ... （https://code.google.com/p/interproscan/wiki/LocalLookupService） ...
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#73Interproscan - Računalni klaster Isabella - Srce
wiki.srce.hr ... module load bioinfo /interproscan/5 .38-76.0 ... interproscan.sh -cpu $NSLOTS -i /apps/bioinfo/interproscan/5 .38-76.0 ...
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#74InterProScan 5.17-56.0 安装和使用
引用自 每日一生信--interproscan安装及使用（终结版）原文官网：http://code.google.com/p/interproscan/wiki/Introduction.
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#75InterProScan 5 is out - InterPro database blog
Towards the end of last year, we released InterProScan 5. ... https://code.google.com/p/interproscan/wiki/Introduction
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#76interproscan 的使用和遇到的问题 - 术之多
IllegalStateException: InterProScan exiting with non-zero status, ... https://code.google.com/p/interproscan/wiki/CompilingBinaries#BLASTALL.
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#77Configuring Torque and InterProScan | Freelancing science
Image via Wikipedia If by the chance, you want to use InterProScan with Torque Resource Manager (queueing system based on PBS project) it ...
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#78【T】每日一生信--interproscan安装及使用（终结版） - 新浪博客
集中输出格式的区别：https://code.google.com/p/interproscan/wiki/OutputFormats. -i 输入的为fasta格式文件。 -goterms开启GO注释，但前面要加 ...
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#79CWL User Guide 19: Custom Types をやってみた - Qiita
... can be downloaded here: https://github.com/ebi-pf-team/interproscan/wiki/HowToDownload Documentation on how to run InterProScan 5 can be ...
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#80interproscan 的使用和遇到的问题 - 极客分享
IllegalStateException: InterProScan exiting with non-zero status, ... https://code.google.com/p/interproscan/wiki/CompilingBinaries#BLASTALL
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#82MicroProse | Civilization Wiki | Fandom
MicroProse Software, Inc. (also known as MicroProse Simulation Software) was a North American video game developer, founded in 1982 by Sid Meier and Bill ...
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#83Dinophysis Toxins: Distribution, Fate in Shellfish and Impacts
... InterProScan5 (version: v5.11-51.0, EMBL-EBI, Hinxton, UK, https://code.google.com/ p/interproscan/wiki/Introduction) to obtain InterPro annotations.
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#84Iloprost - Wikiwand
Iloprost. Connected to: Disease Pulmonary hypertension ChEMBL. From Wikipedia ...
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#85Protein Families: Relating Protein Sequence, Structure, and ...
then they only needed to edit the corresponding Wikipedia article. ... InterPro also provides the InterProScan software for simultaneously searching against ...
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#86The Radish Genome - 第 46 頁 - Google 圖書結果
... against NR, InterProScan against Function prediction InterPro Functional ... be browsed on GBrowse (http:// gmod.org/wiki/GBrowse) at the GBrowse page.
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#87Principles and Methods for Data Science - 第 76 頁 - Google 圖書結果
InterProScan is a stand-alone or web-server tool to search protein families, ... or a class of proteins (c.f., http://www.theseed.org/wiki/ Glossary).
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#88The Lingzhi Mushroom Genome - 第 60 頁 - Google 圖書結果
The gene models were also annotated using InterProScan (version 4.6) (Hunter ... of utilities: (1) Genome browser, (2) Tools, and (3) Wiki page (Table 3.6).
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#89OMICS: Applications in Biomedical, Agricultural, and ...
The system includes Apollo and GBrowse utilities as well as a Wiki, ... and annotation with either BLAST or InterProScan, including applications such as Seg ...
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#90Advances in Postharvest Pathology of Fruits and Vegetables
... Blast2GO (Conesa et al., 2005) and InterProScan (Finn et al., 2016a,b). ... 4http://weatherby.genetics.utah.edu/MAKER/wiki/index.php/MAKER_Tutorial_ ...
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#91The InterProse Corporation - EverybodyWiki Bios & Wiki
InterProse provides cloud computing, and consulting services for Accounts Receivable Management (ARM), debt collection, and electronic payment ...
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#92Genomic Characterization of Emerging Human Fungal Pathogens
We carried out functional annotation with InterProScan 5.34-73.0 (Jones et al. ... these analyses is available on the GitLab wiki page 'orthology-calling3'.
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#93prostaglandin E1 - WIKI 2. Wikipedia Republished
Prostaglandin E1 (PGE1), also known as alprostadil, is a naturally occurring prostaglandin which is used as a medication.
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#94Episcan I-200 by Longport Inc - Wiki Wound
Overview. Dermal and soft tissue ultrasound scanner for high resolution images and virtual biopsies of dermal and subdermal tissue.
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